Command Line¶

New in DeepDiff 5.2.0

DeepDiff provides commandline interface to a subset of functionality that it provides through its Python API.

The commands are:

deep diff command
deep grep command
deep extract command
deep patch command

deep diff command¶

Run

$ deep diff

to get the options:

$ deep diff --help
Usage: deep diff [OPTIONS] T1 T2

  Deep Diff Commandline

  Deep Difference of content in files.
  It can read csv, tsv, json, yaml, and toml files.

  T1 and T2 are the path to the files to be compared with each other.

Options:
  --cutoff-distance-for-pairs FLOAT
                                  [default: 0.3]
  --cutoff-intersection-for-pairs FLOAT
                                  [default: 0.7]
  --cache-size INTEGER            [default: 0]
  --cache-tuning-sample-size INTEGER
                                  [default: 0]
  --cache-purge-level INTEGER RANGE
                                  [default: 1]
  --create-patch                  [default: False]
  --exclude-paths TEXT
  --exclude-regex-paths TEXT
  --math-epsilon DECIMAL
  --get-deep-distance             [default: False]
  --group-by TEXT
  --ignore-order                  [default: False]
  --ignore-string-type-changes    [default: False]
  --ignore-numeric-type-changes   [default: False]
  --ignore-type-subclasses        [default: False]
  --ignore-string-case            [default: False]
  --ignore-nan-inequality         [default: False]
  --include-private-variables     [default: False]
  --log-frequency-in-sec INTEGER  [default: 0]
  --max-passes INTEGER            [default: 10000000]
  --max_diffs INTEGER
  --number-format-notation [f|e]  [default: f]
  --progress-logger [info|error]  [default: info]
  --report-repetition             [default: False]
  --significant-digits INTEGER
  --truncate-datetime [second|minute|hour|day]
  --verbose-level INTEGER RANGE   [default: 1]
  --help                          Show this message and exit.

Example usage:

Let’s imagine we have t1.csv and t2.csv:

t1.csv¶
first_name	last_name	zip
Joe	Nobody	90011
Jack	Mickey	90007
James	Molotov	90001

t2.csv¶
first_name	last_name	zip
Joe	Nobody	90011
James	Molotov	90002
Jack	Mickey	90007

We can run:

$ deep diff t1.csv t2.csv --ignore-order
{'values_changed': {"root[2]['zip']": {'new_value': 90002, 'old_value': 90001}}}

As you can see here the path to the item that is being changed is root[2][‘zip’] which is ok but what if we assume last names are unique and group by last_name?

$ deep diff t1.csv t2.csv --ignore-order --group-by last_name
{ 'values_changed': { "root['Molotov']['zip']": { 'new_value': 90002,
                                                  'old_value': 90001}}}

The path is perhaps more readable now: root[‘Molotov’][‘zip’]. It is more clear that the zip code of Molotov has changed.

Note

The parameters in the deep diff commandline are a subset of those in DeepDiff ‘s Python API.

deep grep command¶

Run

$ deep grep

to get the options:

$ deep grep --help
Usage: deep grep [OPTIONS] ITEM PATH

  Deep Grep Commandline

  Grep through the contents of a file and find the path to the item.
  It can read csv, tsv, json, yaml, and toml files.

Options:
  -i, --ignore-case              [default: False]
  --exact-match                  [default: False]
  --exclude-paths TEXT
  --exclude-regex-paths TEXT
  --verbose-level INTEGER RANGE  [default: 1]
  --help                         Show this message and exit.

t1.csv¶
first_name	last_name	zip
Joe	Nobody	90011
Jack	Mickey	90007
James	Molotov	90001

$ deep grep --ignore-case james t1.csv
{'matched_values': ["root[2]['first_name']"]}

deep extract command¶

Run

$ deep extract

to get the options:

$ deep extract --help
Usage: deep extract [OPTIONS] PATH_INSIDE PATH

  Deep Extract Commandline

  Extract an item from a file based on the path that is passed. It can read
  csv, tsv, json, yaml, and toml files.

Options:
  --help  Show this message and exit.

t1.csv¶
first_name	last_name	zip
Joe	Nobody	90011
Jack	Mickey	90007
James	Molotov	90001

$ deep extract "root[2]['first_name']" t1.csv
'James'

deep patch command¶

Run

$ deep patch --help

to get the options:

$ deep patch --help
Usage: deep patch [OPTIONS] PATH DELTA_PATH

  Deep Patch Commandline

  Patches a file based on the information in a delta file. The delta file
  can be created by the deep diff command and passing the --create-patch
  argument.

  Deep Patch is similar to Linux's patch command. The difference is that it
  is made for patching data. It can read csv, tsv, json, yaml, and toml
  files.

Options:
  -b, --backup    [default: False]
  --raise-errors  [default: False]
  --help          Show this message and exit.

Imagine if we have the following files:

t1.csv¶
first_name	last_name	zip
Joe	Nobody	90011
Jack	Mickey	90007
James	Molotov	90001

t2.csv¶
first_name	last_name	zip
Joe	Nobody	90011
Jack	Mickey	90007
James	Molotov	90001

First we need to create a “delta” file which represents the difference between the 2 files.

$ deep diff t1.csv t2.csv --ignore-order
{'values_changed': {"root[2]['zip']": {'new_value': 90002, 'old_value': 90001}}}

We create the delta by using the deep diff command and passing the –create-patch argument. However since we are using –ignore-order, deep diff will ask us to also use –report-repetition:

deep diff t1.csv t2.csv --ignore-order --report-repetition --create-patch
=}values_changed}root[2]['zip']}    new_valueJ_sss.%

Note that the delta is not human readable. It is meant for us to pass it into a file:

deep diff t1.csv t2.csv --ignore-order --report-repetition --create-patch > patch1.pickle

Now this delta file is ready to be applied by the deep patch command to any json, csv, toml or yaml file! It is expecting the structure of the file to be similar to the one in the csv file though.

Let’s look at this yaml file:

another.yaml

---
-
    first_name: Joe
    last_name: Nobody
    zip: 90011
-
    first_name: Jack
    last_name: Doit
    zip: 22222
-
    first_name: Sara
    last_name: Stanley
    zip: 11111

All that our delta knows is that root[2][‘zip’] has changed to 90002.

Let’s apply the delta:

deep patch --backup another.yaml patch1.pickle --raise-errors

And looking at the another.yaml file, the zip code is indeed updated!

- first_name: Joe
  last_name: Nobody
  zip: 90011
- first_name: Jack
  last_name: Doit
  zip: 22222
- first_name: Sara
  last_name: Stanley
  zip: 90002

As you can see the formatting of the yaml file is changed. This is due to the fact that DeepDiff loads the file into a Python dictionary, modifies it and then writes it back to disk. During this operation, the file loses its original formatting.

Note

The deep patch command only provides a subset of what DeepDiff’s Delta’s Python API provides. The deep patch command is minimalistic and is designed to have a similar interface to Linux’s patch command rather than DeepDiff’s Delta.

Back to DeepDiff 5.2.1 documentation!